Test Code CAFB Culture, Acid-Fast Bacilli (AFB)
Additional Codes
- Expanse Test Name: Culture AFB
- Medinet Ref Code:CAFB
- OV Code:MR*CAFB
Performing Laboratory
St. Lukes Hospital Laboratory/Minnesota Department of Health
Methodology
Direct smears are performed routinely on all specimens except urines. The smear is performed and read by St. Luke’s Microbiology Department. The culture is referred to the Minnesota Department of Health.
Specimen Requirements
Abscess
1. Optimal Volume-Collect as much as possible.
2. Remove surface exudate by wiping with sterile saline or 70% alcohol. Collect fluid abcess material with syringe. For open lesions/abcesses, aspirate material from under the margin of the lesion/abcess. Remove needle and cap syringe.
3. Label syringe with patient's name (first and last), date and actual time of collection, and type of specimen.
4. Maintain sterility and forward promptly refrigerated.
Note: Specimen source is required on request form for processing.
Blood
1. 10 mL (minimum 5 mL adult, 1 ml pediatric) collected in a SPS (yellow-top), or sodium heparin (green top)tube.
2. Clotted specimens will be rejected.
3. Label specimen tube with patient's name (first and last), date and actual time of collection, and type of specimen.
4. Send to the laboratory at room temperature.
Specimen source is required on the request form for processing.
Body Fluid
1. 10 mL (minimum volume: 1 mL) of body fluid in a
screw-capped, sterile container.
2. If submitting specimen in syringe, remove needle and cap
syringe.
3. Label container/syringe with patient’s name (first and
last), date and actual time of collection, and type of
specimen.
4. Maintain sterility and forward promptly at refrigerated
temperature only.
Note: Specimen source is required on request form for processing.
Bone Marrow
1. 10 mL (minimum 1 mL) bone marrow aspirate collected in SPS (yellow top) or sodium heparin (green top ) tube.
2. Label the tube with the patient's name (first and last), date and actual time of collection, and specimen source.
3. Send to the laboratory at room temperature.
Specimen source is required on the request form for processing.
Bronchoalveolar Lavage or Bronchial
Washings
1. Aseptically collect a minimum of 5 mL of bronchoalveolar lavage
or bronchial washings in a screw-capped, sterile container.
2. Avoid contaminating bronchoscope with tap water.
3. Saprophytic mycobacteria may produce false-positive culture or
smear results.
4. Label container with patient’s name (first and last), date
and actual time of collection, and type of specimen.
5. Maintain sterility and forward promptly at refrigerated
temperature.
Note: Specimen source is
required on request form for processing.
Bronchial Brushings
1. Submit bronchial brushings in a screw-capped, sterile
container or in sterile saline.
2. Label container with patient’s name (first and last), date
and actual time of collection, and type of specimen.
3. Maintain sterility and forward promptly.
Note: Specimen source is
required on request form for processing.
Gastric Lavage Fluid
1. Gastric lavage specimens should be reserved for those
circumstances where specimens cannot be obtained by other methods,
such as pediatric patients.
2. Collect a fasting, early-morning (soon after
patient awakes in order to obtain sputum swallowed during sleep)
specimen at least 8 hours after patient has eaten or taken oral
drugs as follows:
A. A disposable gastric tube is inserted and gastric contents
aspirated. Place specimen in a screw-capped, sterile container.
B. Patient then ingests 20 mL to 30 mL of sterile water. This is aspirated and added to first specimen.
3. Label container with patient’s name (first and last),
date and actual time of collection, and type of specimen.
4. Maintain sterility and forward promptly at room temperature.
Note: Specimen source is
required on request form for processing.
Spinal Fluid
1. Submit maximum amount of spinal fluid available in a
screw-capped, sterile vial. (Less than 0.5 mL of spinal
fluid is not acceptable.)
2. Label vial with patient’s name (first and last), date and
actual time of collection, and type of specimen.
3. Forward promptly to the laboratory at refrigerated
temperature.
Note: Specimen source is
required on request form for processing.
Sputum
Sputum, Expectorated
1. Collect an early-morning specimen on at
least 3 consecutive days in a screw-capped, sterile container as
follows:
A. Instruct patient to brush his/her teeth and/or rinse mouth well
with water to minimize contaminating specimen with food particles,
mouthwash, or oral drugs which may inhibit the growth of
mycobacteria.
B. Have patient remove dentures.
C. Instruct patient to take a deep breath, hold it momentarily,
then cough deeply and vigorously into container, and collect 5 mL
to 10 mL of discharged material. (Nasal secretion, saliva,
or 24-hour collection is not acceptable.)
2. Label container with patient’s name (first and last), date
and actual time of collection, and type of specimen.
3. Maintain sterility and forward promptly at refrigerated
temperature.
Note: Specimen source is
required on request form for processing.
Sputum, Induced
1. Collect an early-morning specimen on at least 3
consecutive days in a screw-capped, sterile container as
follows:
A. Induce cough by inhalation of sterile, hypertonic saline.
Collect 5 mL to 10 mL of expectorated material.
2. Label container with patient’s name (first and last), date
and actual time of collection, and type of specimen.
3. Maintain sterility and forward promptly at refrigerated
temperature.
Note: 1. Avoid sputum contamination with
nebulizer reservoir water.
2. Saprophytic mycobacteria in tap water may produce false-positive
culture or smear results.
3. Indicate on request form if specimen is induced sputum, as these
watery specimens resemble saliva and risk rejection as
inadequate.
4. Specimen source is required on request form for
processing.
Tissue
1. Aseptically collect 1 g of tissue, if possible, in a
screw-capped, sterile container without fixative or preservative
avoiding indigenous microbiota. (Specimen submitted in
formalin is not acceptable.) Select caseous portion if
available.
2. Do not immerse in saline or other fluid or wrap in gauze.
3. Label container with patient’s name (first and last), date
and actual time of collection, and type of specimen.
4. Maintain sterility and forward promptly at refrigerated
temperature only. Freezing decreases yield.
Note: Specimen source is required on request
form for processing.
Urine
Collect first-morning specimen on 3 consecutive days for either clean-catch specimen or catheterized specimen. Only 1 specimen/day will be accepted. Organisms accumulate in bladder overnight, so first-morning void provides the best yield. Specimens collected at other times are dilute and are not optimal.
Catheterized
1. Avoid sending urine that has remained stagnant in catheter
tubing for any length of time, do not send catheter bag urine, and
avoid sending urine from catheters that have been in place longer
than 5 to 9 days.
2. Clean catheter with an alcohol sponge, puncture with sterile
needle, and collect in sterile syringe.
3. Pour 40 mL of urine into a screw-capped, sterile container. Mix
well.
4. Label container with patient’s name (first and last), date
and actual time of collection, and type of specimen.
5. Send specimen refrigerated. Maintain sterility and forward
promptly.
Note: Specimen source is required on request
form for processing.
Clean-Catch, Midstream
1. Collect a clean-catch, midstream urine specimen (10 mL of urine)
as follows:
Males
A. Prepare obstetrical Towelette® by opening packages (do not
remove Towelette® until ready to use), and place on sink. Take
top off of plastic urine container, and set on edge of sink. Set
Towelettes® and container so they can be reached while
urinating.
B. Holding back foreskin with 1 hand, if necessary, use first
Towelette® to wash end of penis. Discard Towelette® in
wastebasket.
C. Continue holding back foreskin and gently rinse end of penis
using second and third Towelette®, discarding them in
wastebasket when done.
D. Continue holding back foreskin and begin to urinate into
toilet.
Females
A. Prepare obstetrical Towelette® by opening packages (do not
remove Towelette® until ready to use), and place on sink. Take
top off of plastic urine container, and set on edge of sink. Set
Towelettes® and container so they can be reached while
urinating.
B. With 2 fingers of 1 hand, hold outer folds of vagina apart. With
other hand, gently wash vaginal area from front to back, using
first Towelette®. Discard Towelette® in wastebasket.
C. Still holding outer vaginal skin away from opening through which
urination takes place, rinse area from front to back using
Towelette® #2, discard, and repeat with Towelette® #3.
D. Continue holding outer vaginal folds apart and begin to urinate
into toilet. Lean slightly forward so that urine flows directly
down without running along skin.
2. After first few teaspoons, place screw-capped, sterile urine
container under stream of urine and collect as much urine as
possible (minimum volume: 40 mL). (Specimen <40
mL, unless larger volume is not obtainable, or 24-hour urine
specimen is not acceptable.)
3. After finishing, tighten cap on container securely, and wash any
spilled urine from outside of container.
4. Label container with patient’s name (first and last), date
and actual time of collection, and type of specimen.
5. Send specimen refrigerated. Maintain sterility and forward
promptly.
Note: Specimen source is required on request form for processing.
Suprapubic Aspirate
1. Be sure at least 4 to 6 hours have elapsed since last
urination.
2. Clean suprapubic skin with iodine followed by alcohol.
3. Insert 22-gauge needle attached to a 20-mL syringe into skin
at about a 30° angle to abdominal wall, immediately
superior to the symphysis in midline.
4. Aspirating as one penetrates, stop as urine is obtained.
Fill syringe with 10 mL to 15 mL of urine (infants may require
a smaller syringe and needle).
5. Place specimen in a screw-capped, sterile container.
6. Label container with patient’s name (first and last), date
and actual time of collection, and type of specimen.
7. Send specimen refrigerated. Maintain sterility and forward
promptly.
Note: Specimen source is required on request
form for processing.
Reference Values
Negative
Day(s) Test Set Up
Culture: Monday through Friday
Smear: Monday through Sunday
Test Classification and CPT Coding
87116 - culture
87206 - smear